STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP17881.1Class II aldolase and adducin N-terminal domain protein 5. (266 aa)    
Predicted Functional Partners:
ADP17883.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein 7.
  
    0.631
ADP17882.1
Extra-cytoplasmic solute receptor family protein 116.
       0.564
ADP17880.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 147; Belongs to the LysR transcriptional regulatory family.
       0.530
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.459
ADP14249.1
HpcH/HpaI aldolase/citrate lyase family protein 1; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.451
ADP16413.1
HpcH/HpaI aldolase/citrate lyase family protein 2; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.451
ADP16599.1
HpcH/HpaI aldolase/citrate lyase family protein 3; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.451
ADP18268.1
Citrate lyase beta subunit-like protein; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.451
citE
citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.451
ADP17189.1
Ribulose bisphosphate carboxylase large chain, catalytic domain protein; Belongs to the RuBisCO large chain family.
  
  
 0.413
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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