STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17894.1Bacterial regulatory helix-turn-helix protein, LysR family protein 149; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
ADP17895.1
Short chain dehydrogenase family protein 43; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.554
ADP17896.1
Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
       0.538
ADP19051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 185; Belongs to the LysR transcriptional regulatory family.
  
     0.508
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.496
ADP18088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 156; Belongs to the LysR transcriptional regulatory family.
  
     0.489
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.