Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP17923.1Putative lipoprotein 14. (231 aa)    
Predicted Functional Partners:
ADP13511.1
Hypothetical protein.
  
    0.773
ADP16100.1
YcgR family protein.
  
    0.770
ADP19627.1
Hypothetical protein.
  
    0.769
ADP15655.1
Tetratricopeptide repeat family protein 6.
  
     0.764
ADP18932.1
Hypothetical protein.
  
    0.761
ADP15263.1
Putative lipoprotein 5.
  
     0.741
ADP17844.1
Helix-turn-helix family protein 8.
  
     0.740
ADP14655.1
Curli production assembly/transport component CsgG family protein.
  
     0.735
ADP15437.1
Hypothetical protein.
  
     0.732
ADP18404.1
DltD C-terminal domain protein.
  
     0.710
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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