Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP18009.1Extra-cytoplasmic solute receptor family protein 123. (342 aa)    
Predicted Functional Partners:
ADP14109.1
Hypothetical protein.
 
  
 0.812
ADP14115.1
Hypothetical protein.
 
  
 0.809
ADP16525.1
Hypothetical protein.
 
  
 0.809
ADP17997.1
Hypothetical protein.
 
  
 0.809
ADP18008.1
Membrane dipeptidase family protein 2.
  
    0.781
ADP19792.1
Hypothetical protein.
 
  
 0.750
ADP18010.1
Tat pathway signal sequence domain protein 19.
 
    
0.621
ADP18007.1
FAD binding domain protein 11.
       0.620
ADP18006.1
Bacterial transcriptional regulator family protein 25.
       0.409
ADP18011.1
Gamma-glutamyltranspeptidase family protein 3.
       0.408
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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