STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18060.1RNA polymerase sigma factor FecI 10; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)    
Predicted Functional Partners:
ADP18061.1
FecR family protein 17.
 
 
 0.961
ADP18064.1
FecR family protein 18.
 
 
 0.893
ADP14988.1
FecR family protein 8.
 
 
 0.863
ADP14694.1
FecR family protein 6.
 
 
 0.837
ADP14697.1
FecR family protein 7.
 
 
 0.837
ADP19241.1
FecR family protein 27.
 
 
 0.837
ADP13776.1
FecR family protein 2.
 
 
 0.836
ADP13847.1
FecR family protein 3.
 
 
 0.836
ADP14198.1
FecR family protein 4.
 
 
 0.836
ADP14662.1
FecR family protein 5.
 
 
 0.836
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.