STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18075.1Iron uptake receptor 1. (830 aa)    
Predicted Functional Partners:
ADP14988.1
FecR family protein 8.
 
  
 0.857
ADP14991.1
Putative membrane protein 16.
  
    0.818
ADP18073.1
PepSY-associated TM helix family protein 8.
 
   
 0.799
ADP17162.1
RNA polymerase sigma factor FecI 9; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.794
ADP14987.1
RNA polymerase sigma factor FecI 4; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.790
ADP14993.1
Putative membrane protein 17.
  
    0.761
ADP18077.1
RNA polymerase sigma factor FecI 11; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.725
ADP18076.1
FecR family protein 19.
 
  
 0.722
ADP18074.1
Putative membrane protein 63.
       0.716
ADP16238.1
Putative membrane protein 33.
  
    0.629
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.