STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18098.1feruloyl-CoA synthetase 1. (553 aa)    
Predicted Functional Partners:
ADP18104.1
feruloyl-CoA synthetase 2.
 
    
0.675
ADP18099.1
acyl-CoA dehydrogenase, N-terminal domain protein 13.
  
  
 0.672
ADP18100.1
Short chain dehydrogenase family protein 46.
  
   0.660
ADP18103.1
Thiolase, C-terminal domain protein 7; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.625
ADP18101.1
MaoC like domain protein 10.
     
 0.588
ADP18102.1
Acyl dehydratase 3.
     
 0.583
ADP15066.1
Histone deacetylase domain protein 1.
   
  0.425
thcB
Cytochrome P450.
  
 0.423
fadN
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.422
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.421
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.