STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18105.1Bacterial regulatory helix-turn-helix protein, AraC family protein 29. (366 aa)    
Predicted Functional Partners:
ADP18102.1
Acyl dehydratase 3.
 
     0.586
ADP18101.1
MaoC like domain protein 10.
 
     0.562
ADP18106.1
CoA-transferase family III family protein 38; Belongs to the CoA-transferase III family.
  
    0.555
ADP18103.1
Thiolase, C-terminal domain protein 7; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.552
ADP18099.1
acyl-CoA dehydrogenase, N-terminal domain protein 13.
 
     0.530
ADP18100.1
Short chain dehydrogenase family protein 46.
 
     0.525
ADP18104.1
feruloyl-CoA synthetase 2.
     
 0.486
ADP14188.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 7.
 
 
 0.447
ADP18107.1
Tat pathway signal sequence domain protein 20.
       0.437
ADP15650.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 11.
 
 
 0.421
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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