STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18117.1Drug resistance transporter, Bcr/CflA subfamily protein 3. (382 aa)    
Predicted Functional Partners:
cfa2
Cyclopropane-fatty-acyl-phospholipid synthase 2.
     
 0.527
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.489
ADP16989.1
Major facilitator superfamily protein 35.
  
   
 0.486
ADP18129.1
Major facilitator superfamily protein 44.
  
   
 0.438
rpmG
Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.436
ADP15702.1
Major facilitator superfamily protein 19.
  
   
 0.422
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.