STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18125.1Hemerythrin HHE cation binding domain protein 3. (182 aa)    
Predicted Functional Partners:
ADP18126.1
D-alanyl-D-alanine carboxypeptidase DacC 1; Belongs to the peptidase S11 family.
       0.767
ADP17506.1
Flavin containing amine oxidoreductase family protein.
  
     0.638
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
      0.613
ADP18124.1
Phosphonopyruvate hydrolase.
       0.570
ADP17846.1
Hypothetical protein.
  
     0.548
ADP14810.1
Hypothetical protein.
 
     0.539
ADP16286.1
HAMP domain protein 9.
 
     0.498
hpnC
Squalene synthase HpnC.
  
     0.492
ADP15561.1
LysM domain protein 2.
  
     0.483
ADP15539.1
Membrane protein-like protein 2.
  
     0.470
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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