STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18157.1Bacterial regulatory helix-turn-helix protein, AraC family protein 30. (355 aa)    
Predicted Functional Partners:
ADP18158.1
Bacterial extracellular solute-binding family protein 11.
 
     0.718
ADP18161.1
Binding-protein-dependent transport system inner membrane component family protein 54.
 
   
 0.613
ADP18156.1
Glutathione S-transferase family protein.
       0.603
ADP18160.1
Binding-protein-dependent transport system inner membrane component family protein 53.
 
     0.593
potA-3
Polyamine ABC transporter, ATP-binding family protein 2; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
       0.534
ADP18162.1
Proline racemase family protein; Belongs to the proline racemase family.
 
     0.532
ADP16919.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 19.
 
 
 0.525
ADP16861.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 17.
 
 
 0.523
ADP16933.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 20.
 
 
 0.499
ADP15841.1
Isonitrile hydratase.
 
     0.478
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.