Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP18162.1Proline racemase family protein; Belongs to the proline racemase family. (337 aa)    
Predicted Functional Partners:
arcB
Ornithine cyclodeaminase.
 
  
 0.935
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.919
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.910
ADP15688.1
Proline dehydrogenase family protein.
    
 0.907
pip
Proline iminopeptidase; Belongs to the peptidase S33 family.
     
 0.901
ADP18158.1
Bacterial extracellular solute-binding family protein 11.
 
     0.811
ADP18161.1
Binding-protein-dependent transport system inner membrane component family protein 54.
 
     0.731
ADP16304.1
Dihydrodipicolinate synthetase family protein 3; Belongs to the DapA family.
 
  
 0.725
ADP18160.1
Binding-protein-dependent transport system inner membrane component family protein 53.
 
     0.723
ADP14080.1
Dihydrodipicolinate synthetase family protein 1; Belongs to the DapA family.
 
  
 0.706
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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