STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18163.1Alcohol dehydrogenase (acceptor). (532 aa)    
Predicted Functional Partners:
ADP18164.1
Shikimate/quinate 5-dehydrogenase family protein 1.
       0.780
ADP18165.1
Transketolase, C-terminal domain protein 2.
       0.749
tkt1
Transketolase 1.
       0.749
gldA
Glycerol dehydrogenase.
     
 0.518
ADP18167.1
Bacterial regulatory protein, GntR family protein 53.
       0.505
ADP18882.1
Variant SH3 domain protein.
    
 0.490
ADP17177.1
Transcriptional regulatory protein family protein 1.
   
 0.431
ADP16160.1
Ankyrin repeat family protein 1.
    
 0.411
ADP18591.1
Ankyrin repeat family protein 2.
    
 0.411
ADP19035.1
Ankyrin repeat family protein 3.
    
 0.411
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.