STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18188.1Bacterial regulatory protein, LacI family protein 4. (362 aa)    
Predicted Functional Partners:
ADP13567.1
Ferredoxin-dependent glutamate synthase.
    
 
 0.797
ptsH
Phosphocarrier protein HPr.
 
 
 
 0.747
ADP18187.1
Succinylglutamate desuccinylase/aspartoacylase family protein 5.
       0.699
ADP19159.1
Inner-membrane translocator 56; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.658
ADP17185.1
Bacterial regulatory protein, LacI family protein 3.
 
  
 0.639
ADP13783.1
Inner-membrane translocator 3; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.620
ADP18186.1
Endoribonuclease L-PSP family protein 14.
       0.533
ADP13782.1
ABC transporter family protein 5.
 
  
 0.526
ADP19157.1
ABC transporter family protein 89.
 
  
 0.496
ADP18185.1
Bacterial extracellular solute-binding protein, family 3 family protein 8.
     
 0.492
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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