STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18191.1Isochorismatase family protein 12. (225 aa)    
Predicted Functional Partners:
ADP16435.1
Amidohydrolase family protein 14.
 
     0.707
ADP18190.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 161; Belongs to the LysR transcriptional regulatory family.
 
     0.675
ADP13380.1
Amidohydrolase family protein 1.
 
     0.670
ADP18192.1
Isochorismatase family protein 13.
 
    
0.636
ADP14322.1
Isochorismatase family protein 6.
  
     0.491
ADP17429.1
Peroxiredoxin OsmC.
   
    0.463
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.443
ADP19352.1
Helix-turn-helix family protein 17.
   
    0.433
ADP19396.1
Transcriptional regulator, XRE family domain protein.
   
    0.433
katA1
Catalase 1; Belongs to the catalase family.
  
 
 0.427
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.