STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18268.1Citrate lyase beta subunit-like protein; Belongs to the HpcH/HpaI aldolase family. (331 aa)    
Predicted Functional Partners:
ADP16599.1
HpcH/HpaI aldolase/citrate lyase family protein 3; Belongs to the HpcH/HpaI aldolase family.
  
  
  0.915
ADP16413.1
HpcH/HpaI aldolase/citrate lyase family protein 2; Belongs to the HpcH/HpaI aldolase family.
  
  
  0.914
citE
citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
  
  
  0.911
ADP18267.1
MaoC like domain protein 15.
 
  
 0.756
ADP18269.1
Bacterial regulatory protein, GntR family protein 54.
 
     0.627
ADP17206.1
Porin, Gram-negative type.
  
     0.615
ADP14776.1
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 6.
  
  
 0.550
ADP19291.1
Class II aldolase and adducin N-terminal domain protein 10.
  
    0.537
ADP14247.1
itaconyl-CoA hydratase.
  
  
 0.507
ADP18266.1
acyl-CoA dehydrogenase, N-terminal domain protein 18.
  
  
 0.461
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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