Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADP18329.1Bacterial regulatory helix-turn-helix protein, LysR family protein 164; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
     
 0.749
ADP18327.1
YbaK/prolyl-tRNA synthetase associated domain protein 3; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.631
ADP19203.1
HTH-type transcriptional regulator PecT 1; Belongs to the LysR transcriptional regulatory family.
  
     0.561
ADP13629.1
Uncharacterized HTH-type transcriptional regulator YafC 1; Belongs to the LysR transcriptional regulatory family.
  
     0.550
ADP19051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 185; Belongs to the LysR transcriptional regulatory family.
  
     0.520
ADP18330.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein 8; Belongs to the TPP enzyme family.
       0.504
ADP17431.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 135; Belongs to the LysR transcriptional regulatory family.
  
     0.501
ADP17025.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 120; Belongs to the LysR transcriptional regulatory family.
  
     0.488
ADP15776.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 65; Belongs to the LysR transcriptional regulatory family.
  
     0.478
ADP18389.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 166; Belongs to the LysR transcriptional regulatory family.
  
     0.478
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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