STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gcdHglutaryl-CoA dehydrogenase. (397 aa)    
Predicted Functional Partners:
ADP17817.1
enoyl-CoA hydratase/isomerase family protein 22.
  
 0.969
fadB1
enoyl-CoA hydratase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.953
ADP16971.1
acetyl-CoA acetyltransferase family protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.944
atoB1
acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.944
ADP17264.1
acetyl-CoA acetyltransferase family protein 3; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.944
ADP17820.1
acetyl-CoA acetyltransferase family protein 5; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.944
lpdA3
Dihydrolipoyl dehydrogenase 3.
  
 0.937
ADP13469.1
CoA-transferase family III family protein 1; Belongs to the CoA-transferase III family.
 
 
  0.932
ADP14233.1
CoA-transferase family III family protein 4; Belongs to the CoA-transferase III family.
 
 
  0.932
ADP19097.1
CoA-transferase family III family protein 45; Belongs to the CoA-transferase III family.
 
 
  0.932
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.