STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
boxBbenzoyl-CoA oxygenase, B subunit. (475 aa)    
Predicted Functional Partners:
boxC
benzoyl-CoA-dihydrodiol lyase.
 
 
 0.996
boxA
benzoyl-CoA oxygenase/reductase, BoxA protein.
 
  
 0.995
aroK-2
Helix-turn-helix family protein 11; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.904
ADP18340.1
2-hydroxylaminobenzoate mutase.
 
     0.832
ADP18341.1
Benzoate-coenzyme A ligase.
 
   
 0.818
ADP18342.1
Alpha/beta hydrolase fold family protein 13.
 
    0.794
paaB
phenylacetate-CoA oxygenase subunit PaaB.
  
 
 0.716
ADP18343.1
Receptor family ligand binding region family protein 24.
 
     0.687
ADP18335.1
MaoC like domain protein 16.
  
  
 0.584
thcB
Cytochrome P450.
 
 
 0.519
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.