STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP18358.1Arginase family protein 1; Belongs to the arginase family. (317 aa)    
Predicted Functional Partners:
ADP16536.1
Spermine synthase.
  
 
 0.939
ADP13613.1
Spermine/spermidine synthase family protein 1.
  
 
 0.933
ADP15607.1
Spermine/spermidine synthase family protein 2.
  
 
 0.933
ADP13648.1
Amidohydrolase-like protein.
   
 0.928
ADP13458.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
    
 0.913
ADP18939.1
Orn/Lys/Arg decarboxylase, C-terminal domain protein 1.
  
 
 0.913
ADP19076.1
Orn/Lys/Arg decarboxylase, C-terminal domain protein 2.
  
 
 0.913
speG
Spermidine N(1)-acetyltransferase.
     
 0.905
speE
Spermine/spermidine synthase family protein 3; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
  0.900
rocD
Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.
  
 0.714
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.