Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP18360.1General L-amino acid-binding periplasmic protein AapJ 1. (340 aa)    
Predicted Functional Partners:
ADP18355.1
General L-amino acid transport ATP-binding protein AapP 2.
 
 0.981
ADP19210.1
General L-amino acid transport system permease protein AAPM.
 
 0.966
ADP19211.1
General L-amino acid transport system permease protein AapQ.
 
 
 0.961
ADP19209.1
General L-amino acid transport ATP-binding protein AapP 3.
 
 0.959
ADP18356.1
Amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 18.
  
 0.941
ADP18357.1
Bacterial extracellular solute-binding protein, family 3 family protein 9.
    
  0.923
ADP14623.1
General L-amino acid transport ATP-binding protein AapP 1.
 
 
 0.616
ADP18359.1
Bacterial transcriptional regulator family protein 29.
       0.504
ADP16853.1
Glutamine transport ATP-binding protein GlnQ 3.
 
 
 0.473
ADP13384.1
Glutamine transport ATP-binding protein GlnQ 1.
  
 
 0.458
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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