STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phnJPhosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (297 aa)    
Predicted Functional Partners:
phnG
Phosphonate C-P lyase system protein PhnG.
 
 
 0.999
ADP18378.1
Amidohydrolase family protein 22.
 
 
 0.998
phnI
Phosphonate metabolism PhnI.
 
 
 0.998
ADP18383.1
Phosphonate C-P lyase system protein PhnH.
 
 
 0.998
phnK
Phosphonate C-P lyase system protein PhnK.
 
 0.997
phnL
Phosphonate C-P lyase system protein PhnL.
 
  
 0.995
ADP18386.1
Amidohydrolase family protein 23.
 
 
 0.992
phnD
Phosphonate ABC transporter, periplasmic phosphonate binding protein.
 
  
 0.977
phnF
Phosphonates metabolism transcriptional regulator PhnF.
 
  
 0.974
phnN
Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.962
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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