STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catCMuconolactone delta-isomerase. (91 aa)    
Predicted Functional Partners:
catB
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.997
pcaD2
3-oxoadipate enol-lactonase 2.
 
 
 0.993
pcaD1
3-oxoadipate enol-lactonase 1.
 
 
 0.945
ADP17005.1
Carboxymuconolactone decarboxylase family protein 3.
    
 0.912
ADP19293.1
4-carboxymuconolactone decarboxylase.
    
 0.912
ADP15300.1
Carboxymuconolactone decarboxylase family protein 2.
     
  0.900
ADP19250.1
YCII-related domain protein 1.
 
    0.900
ADP17532.1
Dioxygenase family protein 2.
 
  
 0.880
ADP16430.1
Dioxygenase family protein 1.
 
  
 0.878
ADP15132.1
Catechol 1,2-dioxygenase.
 
  
 0.863
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.