STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW46965.1Lrp/AsnC family transcriptional regulator. (154 aa)    
Predicted Functional Partners:
SDX26205.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.773
SDW90779.1
Transcriptional regulator, AsnC family.
  
     0.754
SDX68255.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.628
SDW47011.1
Methionine-gamma-lyase.
       0.527
SDX90739.1
Glutamate synthase (NADH) large subunit.
     
 0.484
Your Current Organism:
Lutibacter oricola
NCBI taxonomy Id: 762486
Other names: DSM 24956, KCTC 23668, L. oricola, Lutibacter oricola Sung et al. 2015, Lutibacter sp. UDC377, strain UDC377
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.