STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX64227.1Cytochrome c. (333 aa)    
Predicted Functional Partners:
SDX78714.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
    
 0.749
SDW72084.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.748
SDX82884.1
Outer membrane protein TolC.
  
     0.733
SDX49057.1
Iron complex outermembrane recepter protein.
  
     0.720
SDX82832.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.679
SDX82792.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.635
SDX78103.1
Copper chaperone CopZ.
 
     0.630
SDX82749.1
Hypothetical protein.
  
     0.609
SDX64270.1
Hypothetical protein.
       0.523
SDX64301.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.485
Your Current Organism:
Lutibacter oricola
NCBI taxonomy Id: 762486
Other names: DSM 24956, KCTC 23668, L. oricola, Lutibacter oricola Sung et al. 2015, Lutibacter sp. UDC377, strain UDC377
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.