STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEH81635.1Sorbitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
OEH81799.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.936
OEH81195.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.936
OEH82157.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 
0.836
OEH82993.1
PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.817
OEH83750.1
PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.817
OEH83282.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
  
 
 0.805
OEH84095.1
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.801
OEH83410.1
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.801
OEH81221.1
Putative selenate reductase subunit YgfK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.793
OEH82112.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.775
Your Current Organism:
Enterococcus rivorum
NCBI taxonomy Id: 762845
Other names: CCM 7986, E. rivorum, Enterococcus rivorum Niemi et al. 2012, Enterococcus sp. HAMBI 3055, Enterococcus sp. HAMBI 3119, Enterococcus sp. HAMBI 3120, Enterococcus sp. HAMBI 3121, Enterococcus sp. HAMBI 3122, Enterococcus sp. HAMBI 3124, HAMBI 3055, LMG 25899, LMG:25899, VYH 91390, strain S299
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