STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50664.1NHL repeat containing protein; COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase; KEGG: phe:Phep_1358 NHL repeat containing protein; SPTR: Putative uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2233). (310 aa)    
Predicted Functional Partners:
ADY50666.1
Hypothetical protein; InterPro IPR010916; KEGG: bvu:BVU_3501 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2233).
 
     0.857
ADY50665.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR 004104: IPR 006311; KEGG: kol:Kole_0676 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
 
     0.807
ADY50663.1
Hypothetical protein; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; KEGG: sma:SAV_5466 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.793
ADY50660.1
KEGG: cpi:Cpin_5277 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.569
ADY50661.1
KEGG: cpi:Cpin_5276 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.565
ADY50659.1
TonB-dependent receptor plug; InterPro IPR011662: IPR 012910: IPR 000531; KEGG: cpi:Cpin_5278 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain.
 
     0.548
ADY50662.1
Cell surface receptor IPT/TIG domain protein; InterPro IPR002909: IPR 013017: IPR 001258; KEGG: phe:Phep_1359 NHL repeat containing protein; PFAM: cell surface receptor IPT/TIG domain protein; NHL repeat containing protein; SMART: cell surface receptor IPT/TIG domain protein; SPTR: NHL repeat containing protein; PFAM: IPT/TIG domain; NHL repeat.
       0.502
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.