STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50710.1Cytochrome-c oxidase; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: cpi:Cpin_5783 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I. (708 aa)    
Predicted Functional Partners:
ADY50709.1
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR009056: IPR 003468: IPR 003088; KEGG: cpi:Cpin_3778 cytochrome c oxidase mono-heme subunit/FixO; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I; SPTR: Cytochrome C oxidase mono-heme subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
 
 0.999
ADY50950.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR 004677: IPR 003468: IPR 009056; KEGG: phe:Phep_2484 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase, cbb3-type; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subun [...]
 
0.996
ADY50952.1
COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR003088: IPR 009056; KEGG: phe:Phep_2486 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
 0.988
ADY50707.1
KEGG: cpi:Cpin_5780 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.970
ADY50708.1
KEGG: cpi:Cpin_3779 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.944
ADY53164.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.916
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
    
 0.912
ADY53159.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298: IPR 001226; KEGG: phe:Phep_0299 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; SPTR: Cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase subunit III.
  
 
 0.911
ADY53160.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: phe:Phep_0298 cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase subunit III.
  
 
 0.911
ADY53163.1
COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: phe:Phep_0295 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
    
0.910
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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