STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50766.1Putative membrane protein; InterPro IPR019861; KEGG: phe:Phep_0108 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein. (319 aa)    
Predicted Functional Partners:
ADY50767.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR 006665: IPR 011659; KEGG: cpi:Cpin_5752 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
     0.945
ADY50765.1
Hypothetical protein; KEGG: phe:Phep_0107 conserved repeat domain protein; SPTR: Conserved repeat domain protein.
 
     0.942
ADY50764.1
InterPro IPR008160; KEGG: bcy:Bcer98_2389 triple helix repeat-containing collagen; PFAM: Collagen triple helix repeat-containing protein; SPTR: Hypothetical glycine-rich protein; PFAM: Collagen triple helix repeat (20 copies).
       0.773
ADY51610.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR 006664: IPR 011659; KEGG: sli:Slin_3584 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
     0.760
ADY54216.1
InterPro IPR001434; KEGG: phe:Phep_1646 conserved repeat domain protein; PFAM: protein of unknown function DUF11; SPTR: Conserved repeat domain protein; TIGRFAM: conserved repeat domain protein; PFAM: Adaptor complexes medium subunit family; Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
  
     0.760
ADY53572.1
Protein involved in gliding motility GldD; InterPro IPR019850; KEGG: phe:Phep_4156 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated lipoprotein GldD; TIGRFAM: gliding motility-associated lipoprotein GldD.
  
     0.719
ADY54380.1
KEGG: phe:Phep_3608 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.701
ADY51653.1
KEGG: phe:Phep_1264 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.698
ADY50597.1
COGs: COG1832 CoA-binding protein; KEGG: phe:Phep_3600 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.688
ADY53061.1
Tetratricopeptide domain protein; InterPro IPR019734: IPR 013026; KEGG: phe:Phep_0389 tetratricopeptide domain protein; SPTR: Tetratricopeptide domain protein.
  
   
 0.682
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.