STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50784.1COGs: COG3871 Uncharacterized stress protein (general stress protein 26); KEGG: cpi:Cpin_6715 pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: General stress protein; PFAM: Pyridoxamine 5'-phosphate oxidase. (173 aa)    
Predicted Functional Partners:
ADY50860.1
CsbD family protein; InterPro IPR008462; KEGG: cpi:Cpin_1931 CsbD family protein; PFAM: CsbD family protein; SPTR: CsbD-like protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.812
ADY53459.1
KEGG: phe:Phep_4122 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.765
ADY53017.1
COGs: COG2910 Putative NADH-flavin reductase; InterPro IPR000846; KEGG: fjo:Fjoh_5020 NAD-dependent epimerase/dehydratase; PFAM: dihydrodipicolinate reductase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NmrA-like family.
  
    0.650
ADY52380.1
COGs: COG3569 Topoisomerase IB; InterPro IPR001631; KEGG: fba:FIC_01163 DNA topoisomerase IB (poxvirus type); PRIAM: DNA topoisomerase; SPTR: DNA topoisomerase IB (Poxvirus type); PFAM: Eukaryotic DNA topoisomerase I, catalytic core.
 
     0.601
ADY51733.1
Protein of unknown function DUF892; COGs: COG3685 conserved hypothetical protein; InterPro IPR010287; KEGG: dfe:Dfer_5574 protein of unknown function DUF892; PFAM: protein of unknown function DUF892; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF892).
  
     0.594
ADY51858.1
Domain of unknown function DUF1731; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509: IPR 013549: IPR 010099; KEGG: cpi:Cpin_7089 domain of unknown function DUF1731; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Cell-division inhibitor; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777.
   
    0.583
ADY52551.1
Domain of unknown function DUF1731; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR013549; KEGG: cpi:Cpin_7089 domain of unknown function DUF1731; PFAM: domain of unknown function DUF1731; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777.
   
    0.583
ADY53082.1
Domain of unknown function DUF1731; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509: IPR 013549: IPR 010099; KEGG: sli:Slin_0847 domain of unknown function DUF1731; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777.
   
    0.583
ADY51866.1
Protein of unknown function DUF892; COGs: COG3685 conserved hypothetical protein; InterPro IPR010287; KEGG: cpi:Cpin_0993 protein of unknown function DUF892; PFAM: protein of unknown function DUF892; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF892).
  
     0.560
ADY50785.1
COGs: COG0408 Coproporphyrinogen III oxidase; InterPro IPR001260: IPR 018375; KEGG: phe:Phep_2162 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase; PRIAM: Coproporphyrinogen oxidase; SPTR: Coproporphyrinogen oxidase; PFAM: Coproporphyrinogen III oxidase.
       0.549
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.