STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50801.1NUDIX hydrolase; InterPro IPR020476: IPR 000086: IPR 020084; KEGG: phe:Phep_1465 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. (203 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.694
ADY52284.1
acyl-CoA reductase; InterPro IPR008670; KEGG: phe:Phep_3204 acyl-CoA reductase; PFAM: acyl-CoA reductase; SPTR: Putative uncharacterized protein; PFAM: Acyl-CoA reductase (LuxC).
  
    0.678
ADY50748.1
KEGG: phe:Phep_3313 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acyl-protein synthetase, LuxE.
  
     0.669
ADY50799.1
KEGG: phe:Phep_1462 hypothetical protein; SPTR: Orotate phosphoribosyltransferase.
       0.612
ADY54105.1
KEGG: phe:Phep_0247 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.514
ADY52639.1
InterPro IPR006628; KEGG: phe:Phep_1398 PUR-alpha/beta/gamma DNA/RNA-binding; SMART: PUR-alpha/beta/gamma DNA/RNA-binding; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3276).
  
     0.473
ADY54313.1
KEGG: phe:Phep_0827 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cell division protein ZapA.
 
     0.422
ileS
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
  
    0.414
ADY51339.1
Orn/DAP/Arg decarboxylase 2; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: phe:Phep_2320 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Arginine decarboxylase, biosynthetic; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain.
 
     0.400
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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