STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50833.1Protein of unknown function DUF214; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: phe:Phep_3544 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (309 aa)    
Predicted Functional Partners:
ADY52286.1
Sigma 54 interacting domain protein; COGs: COG2884 ATPase involved in cell division; InterPro IPR003439: IPR 017871: IPR 002078: IPR 003593; KEGG: phe:Phep_3207 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
 
 
 0.978
ADY50832.1
KEGG: phe:Phep_3545 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3098).
 
     0.863
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
    0.844
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.841
ADY53805.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: phe:Phep_3838 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23.
 
 
 
 0.825
ADY50829.1
Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterPro IPR002606: IPR 015864: IPR 015865: IPR 001412; KEGG: phe:Phep_3549 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; SPTR: Riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
       0.790
ADY51730.1
PAS/PAC sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR005467: IPR 000700: IPR 004358: IPR 000014: IPR 001610: IPR 003661: IPR 003594: IPR 013767: IPR 013656: IPR 013655; KEGG: phe:Phep_1810 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: [...]
 
 
 
 0.731
ADY53133.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR 005467: IPR 001789: IPR 003660: IPR 007891: IPR 003018: IPR 003661: IPR 003594; KEGG: cpi:Cpin_5566 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase HAMP region domain protein; GAF domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein; response regulator receiver; SP [...]
   
 
 0.729
ADY50834.1
KEGG: pyo:PY01855 hypothetical protein; SPTR: Predicted protein.
       0.521
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
 
  
 0.441
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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