STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50926.1Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fjo:Fjoh_1893 peptidase M23B; PFAM: Peptidase M23; SPTR: Putative peptidase; PFAM: Peptidase family M23. (322 aa)    
Predicted Functional Partners:
ADY50925.1
COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: phe:Phep_2536 regulatory protein MerR; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator; PFAM: MerR family regulatory protein.
  
    0.721
ADY53974.1
KEGG: bvu:BVU_0426 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.692
ADY53059.1
Protein of unknown function DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: aas:Aasi_0691 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583.
 
   
 0.672
ADY50927.1
DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.514
ADY50929.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
     
 0.473
ADY50715.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005543: IPR 005311: IPR 001460; KEGG: phe:Phep_3331 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA domain containing protein; SPTR: Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain.
 
   
 0.470
ADY52490.1
KEGG: phe:Phep_0994 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.453
ADY53062.1
Peptidoglycan glycosyltransferase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR 001460; KEGG: phe:Phep_0388 glycosyl transferase family 51; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Glycosyl transferase family 51; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
  
   
 0.450
ADY50928.1
KEGG: phe:Phep_1142 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.448
ADY51634.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR019734: IPR 013026: IPR 006665: IPR 006664: IPR 001440: IPR 011659; KEGG: phe:Phep_2066 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; Tetratricopeptide TPR_1 repeat-containing protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.440
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.