STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50928.1KEGG: phe:Phep_1142 hypothetical protein; SPTR: Putative uncharacterized protein. (298 aa)    
Predicted Functional Partners:
ADY50929.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
       0.841
ADY50927.1
DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
 
     0.815
ADY50931.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: phe:Phep_1145 outer membrane assembly lipoprotein YfiO; SPTR: Conserved hypothetical lipoprotein; TIGRFAM: outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO.
 
     0.783
ADY53061.1
Tetratricopeptide domain protein; InterPro IPR019734: IPR 013026; KEGG: phe:Phep_0389 tetratricopeptide domain protein; SPTR: Tetratricopeptide domain protein.
 
     0.778
ADY53811.1
KEGG: phe:Phep_3831 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
ADY53448.1
KEGG: phe:Phep_4061 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
ADY50930.1
KEGG: phe:Phep_1144 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.771
ADY51653.1
KEGG: phe:Phep_1264 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
ADY52517.1
Probable protein-translocating porin PorT; KEGG: phe:Phep_0978 hypothetical protein; SPTR: Putative uncharacterized protein; TC 1.B.44.1.1.
  
     0.766
ADY52507.1
InterPro IPR005632; KEGG: phe:Phep_0987 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: Cationic outer membrane protein; PFAM: Outer membrane protein (OmpH-like).
  
     0.760
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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