STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY50981.1KEGG: phe:Phep_3013 hypothetical protein; SPTR: Putative uncharacterized protein. (206 aa)    
Predicted Functional Partners:
ADY50980.1
Transcriptional regulator; KEGG: gfo:GFO_2557 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.962
ADY50979.1
COGs: COG4452 Inner membrane protein involved in colicin E2 resistance; InterPro IPR010364; KEGG: bth:BT_1254 hypothetical protein; PFAM: Inner membrane CreD family protein; SPTR: Inner membrane protein; PFAM: Inner membrane protein CreD.
 
     0.857
ADY50978.1
KEGG: cpi:Cpin_1549 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2809).
 
     0.737
ADY50640.1
KEGG: phe:Phep_1886 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.613
ADY50639.1
Transglutaminase domain protein; InterPro IPR000215; KEGG: phe:Phep_1887 transglutaminase domain protein; SPTR: Transglutaminase domain protein.
 
     0.599
ADY51418.1
Metallophosphoesterase; InterPro IPR000568: IPR 000408: IPR 004843; KEGG: cpi:Cpin_1411 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; Surface antigen.
  
     0.551
ADY50982.1
Gluconate kinase, SKI family; COGs: COG3265 Gluconate kinase; InterPro IPR006001: IPR 000623; KEGG: pat:Patl_3644 carbohydrate kinase; PFAM: shikimate kinase; PRIAM: Gluconokinase; SPTR: Gluconate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family.
       0.535
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
  
 0.523
ADY51885.1
Metallophosphoesterase; InterPro IPR004843; KEGG: dfe:Dfer_2538 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.
  
     0.479
ADY54012.1
InterPro IPR011129: IPR 002059; KEGG: sli:Slin_4054 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain.
  
     0.411
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.