STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51000.1KEGG: cpy:Cphy_0933 hypothetical protein; SPTR: Putative uncharacterized protein. (326 aa)    
Predicted Functional Partners:
ADY52606.1
PDZ/DHR/GLGF domain protein; InterPro IPR006626; KEGG: sli:Slin_1130 PDZ/DHR/GLGF domain protein; SPTR: PDZ/DHR/GLGF domain protein.
 
     0.707
ADY54156.1
KEGG: phe:Phep_2692 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.686
ADY52604.1
Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR016286: IPR 000933; KEGG: phe:Phep_2703 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
     0.635
ADY52613.1
Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR016286: IPR 000933; KEGG: phe:Phep_2693 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
     0.546
ADY52619.1
Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR016286: IPR 000933; KEGG: phe:Phep_2695 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
     0.546
ADY54154.1
Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR016286: IPR 000933; KEGG: phe:Phep_2693 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
     0.528
ADY52624.1
InterPro IPR008000; KEGG: cpi:Cpin_1991 protein of unknown function DUF718; PFAM: protein of unknown function DUF718; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF718).
 
     0.489
ADY50999.1
KEGG: ehi:EHI_110740 hypothetical protein; SPTR: Possible late embryogenesis abundant protein.
       0.476
ADY51207.1
TonB-dependent receptor; InterPro IPR006626; KEGG: sde:Sde_3285 TonB-dependent receptor; SPTR: Putative uncharacterized protein; TIGRFAM: parallel beta-helix repeat (two copies).
  
     0.441
ADY51208.1
Hypothetical protein; InterPro IPR022272: IPR 006626; KEGG: sfr:Sfri_3103 poly(beta-D-mannuronate) lyase; SPTR: Alginate lyase.
  
     0.438
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.