STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51032.1KEGG: bth:BT_2961 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase. (279 aa)    
Predicted Functional Partners:
ADY53643.1
KEGG: rxy:Rxyl_3137 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Beta-galactosidase.
  
     0.755
ADY53641.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_3134 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
 
   0.731
ADY53638.1
Hypothetical protein; InterPro IPR017441; KEGG: fba:FIC_00184 hypothetical protein; SPTR: Conserved domain protein.
  
     0.646
ADY53602.1
KEGG: bfs:BF4285 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.623
ADY53640.1
TonB-dependent receptor; InterPro IPR011662: IPR 012910: IPR 000531; KEGG: pdi:BDI_3133 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain.
  
     0.574
ADY51260.1
KEGG: phe:Phep_2408 heparinase II/III family protein; SPTR: Coagulation factor 5/8 type domain protein.
  
     0.559
ADY51307.1
KEGG: bth:BT_3608 hypothetical protein; SPTR: Sialidase; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal.
  
     0.557
ADY50922.1
InterPro IPR006104; KEGG: phe:Phep_2749 glycoside hydrolase family 2 sugar binding; PFAM: glycoside hydrolase family 2 sugar binding; SPTR: Glycoside hydrolase family 2 sugar binding.
  
 
 0.541
ADY50887.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: cpi:Cpin_4993 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
 
   0.517
ADY50901.1
KEGG: phe:Phep_2787 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.510
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.