STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51051.1COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR 006104: IPR 006102: IPR 006103: IPR 004199; KEGG: fjo:Fjoh_4102 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; PRIAM: Beta-galactosidase; SPTR: Candidate Beta-galactosidase; Glycoside hydrolase family 2; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta g [...] (1098 aa)    
Predicted Functional Partners:
ADY53938.1
Glycoside hydrolase family 42 domain 5 loop region; InterPro IPR004199; KEGG: sus:Acid_2894 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 42 domain 5 loop region; SPTR: Glycoside hydrolase family 2 protein; PFAM: Beta galactosidase small chain.
  
  
  0.852
ADY51052.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: phe:Phep_2756 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
 
     0.832
xylA
COGs: COG2115 Xylose isomerase; InterPro IPR001998: IPR 013452: IPR 012307; KEGG: phe:Phep_1604 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family.
    
 0.808
ADY51078.1
COGs: COG3345 Alpha-galactosidase; InterPro IPR000111: IPR 002252; KEGG: phe:Phep_1706 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Alpha-galactosidase; PFAM: Melibiase.
 
 
 0.754
ADY51371.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR 006104: IPR 006102: IPR 006103; KEGG: cce:Ccel_1239 carbohydrate binding family 6; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: Carbohydrate binding family 6; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.754
ADY50883.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR 006104: IPR 006102: IPR 006103; KEGG: phe:Phep_2816 beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: Beta-galactosidase; PFAM: domain; Di-glucose binding within endoplasmic reticulum; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.753
ADY51369.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR 006102; KEGG: pdi:BDI_3296 beta-glycosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; SPTR: Glycoside hydrolase family 2, candidate beta-glycosidase; PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.751
ADY52739.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR 006104: IPR 006102: IPR 006103; KEGG: phe:Phep_2757 glycoside hydrolase family 2 sugar binding; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: Glycoside hydrolase family 2 sugar binding; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.749
ADY54145.1
Alpha-galactosidase; InterPro IPR002241: IPR 008009: IPR 000111; KEGG: phe:Phep_0715 alpha-galactosidase; PFAM: Ig family protein; glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Alpha-galactosidase; PFAM: Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase; Putative Ig domain.
 
 
 0.749
ADY53700.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR 006104: IPR 006102: IPR 006103; KEGG: cpi:Cpin_6171 glycoside hydrolase family 2 sugar binding; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: Glycoside hydrolase family 2 sugar binding; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.748
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.