STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51080.1Hypothetical protein; KEGG: sli:Slin_5064 conserved repeat domain protein; SPTR: Putative uncharacterized protein; PFAM: Pregnancy-associated plasma protein-A. (537 aa)    
Predicted Functional Partners:
ADY51081.1
Hypothetical protein; KEGG: reu:Reut_A1126 aspartate kinase; SPTR: Lipoprotein, putative.
       0.697
ADY53175.1
KEGG: cpi:Cpin_7153 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolase catalytic core.
  
 
   0.460
ADY51007.1
Tetratricopeptide domain protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR013026: IPR 019734; KEGG: phe:Phep_3307 tetratricopeptide domain protein; SPTR: Tetratricopeptide domain protein.
  
     0.424
ADY51403.1
Pectate lyase/Amb allergen; COGs: COG3866 Pectate lyase; InterPro IPR002022: IPR 006626; KEGG: nde:NIDE2720 hypothetical protein; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; Parallel beta-helix repeat; SPTR: Putative uncharacterized protein; PFAM: Pectate lyase.
  
     0.408
ADY51082.1
KEGG: phe:Phep_2452 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.402
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.