STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51173.1Hypothetical protein; InterPro IPR019734: IPR 013026; KEGG: fba:FIC_01774 hypothetical protein; SPTR: TPR repeat-containing protein. (432 aa)    
Predicted Functional Partners:
ADY51422.1
COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR003567: IPR 002541; KEGG: phe:Phep_3217 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c family biogenesis protein; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF.
  
 
 0.808
ADY51174.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173: IPR 000917; KEGG: fba:FIC_01776 glycosyl transferase, family 2; PFAM: glycosyl transferase family 2; sulfatase; SPTR: Glycosyl transferase family protein; PFAM: Sulfatase; Glycosyl transferase family 2; Chitin synthase.
 
    0.795
ADY51175.1
KEGG: fba:FIC_01777 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.787
ADY51177.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR 003018: IPR 013767: IPR 013655: IPR 013656: IPR 003661: IPR 003594: IPR 001789: IPR 005467: IPR 000700:I PR008207: IPR 001610: IPR 004358; KEGG: fba:FIC_01779 PAS/PAC domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC rep [...]
 
   
 0.677
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
    0.462
ADY51176.1
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: fba:FIC_01778 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain.
  
     0.403
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.