STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51270.1FG-GAP repeat protein; InterPro IPR013517; KEGG: dth:DICTH_0178 cell surface protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat protein. (1204 aa)    
Predicted Functional Partners:
ADY51269.1
KEGG: phe:Phep_0345 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.543
ADY51268.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_0344 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
       0.508
ADY51267.1
TonB-dependent receptor plug; InterPro IPR018247: IPR 012910: IPR 000531; KEGG: phe:Phep_1281 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
       0.481
ADY51266.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: phe:Phep_0787 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor.
       0.449
ADY51271.1
KEGG: gym:GYMC10_3579 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.436
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.