STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51343.1Na+ dependent nucleoside transporter domain protein; COGs: COG1972 Nucleoside permease; InterPro IPR002668: IPR 011642: IPR 011657; KEGG: cpi:Cpin_4717 Na+ dependent nucleoside transporter domain protein; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; SPTR: Na+ dependent nucleoside transporter domain protein; PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter. (421 aa)    
Predicted Functional Partners:
ADY51344.1
Protein of unknown function DUF151; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729: IPR 001943; KEGG: phe:Phep_2055 protein of unknown function DUF151; PFAM: protein of unknown function DUF151; UvrB/UvrC protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif.
       0.682
ADY51345.1
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308: IPR 014730: IPR 014731; KEGG: phe:Phep_2056 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
       0.631
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
      0.601
ADY51346.1
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR012255: IPR 014730; KEGG: phe:Phep_2057 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein domain.
       0.534
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.