STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51348.1Chromate transporter, chromate ion transporter (CHR) family; COGs: COG2059 Chromate transport protein ChrA; InterPro IPR014047: IPR 003370; KEGG: phe:Phep_2059 chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; SPTR: Chromate transporter, chromate ion transporter (CHR) family; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family. (400 aa)    
Predicted Functional Partners:
ADY51347.1
InterPro IPR019734: IPR 013026: IPR 001440; KEGG: phe:Phep_2058 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
     0.803
ADY51346.1
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR012255: IPR 014730; KEGG: phe:Phep_2057 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein domain.
       0.602
ADY51345.1
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308: IPR 014730: IPR 014731; KEGG: phe:Phep_2056 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
       0.575
ADY51344.1
Protein of unknown function DUF151; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729: IPR 001943; KEGG: phe:Phep_2055 protein of unknown function DUF151; PFAM: protein of unknown function DUF151; UvrB/UvrC protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif.
       0.534
ADY51245.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sli:Slin_5639 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold.
  
     0.481
ADY52542.1
Transcriptional regulator, AraC family; COGs: COG4275 conserved hypothetical protein; InterPro IPR020449: IPR 018062: IPR 018060: IPR 018634: IPR 000005; KEGG: dfe:Dfer_2046 transcriptional regulator, AraC family; PFAM: Chromate resistance exported protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Chromate resistance exported protein; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
   
 0.400
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.