STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51378.1Hypothetical protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: phe:Phep_2778 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acetyl xylan esterase (AXE1). (476 aa)    
Predicted Functional Partners:
ADY50916.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311: IPR 012307: IPR 017909; KEGG: phe:Phep_2777 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel.
 
     0.789
ADY50902.1
KEGG: phe:Phep_2786 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.786
ADY50904.1
KEGG: phe:Phep_2784 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.785
ADY52738.1
KEGG: phe:Phep_2776 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.773
ADY52740.1
KEGG: phe:Phep_2758 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.768
ADY50909.1
Exported exo-alpha-sialidase; COGs: COG4692 neuraminidase (sialidase); KEGG: phe:Phep_2779 exported exo-alpha-sialidase; SPTR: Exported exo-alpha-sialidase; PFAM: BNR/Asp-box repeat.
 
     0.765
ADY51377.1
Glycoside hydrolase family 28; COGs: COG5434 Endopygalactorunase; InterPro IPR000743; KEGG: scl:sce6377 hypothetical protein; PFAM: glycoside hydrolase family 28; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolases family 28.
       0.762
ADY51061.1
KEGG: phe:Phep_2742 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.754
ADY50880.1
KEGG: phe:Phep_2820 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.753
ADY50901.1
KEGG: phe:Phep_2787 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.753
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.