STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51384.1Capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR005702: IPR 003856; KEGG: sli:Slin_4089 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative tyrosine-protein kinase in cps region; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. (767 aa)    
Predicted Functional Partners:
ADY51383.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR 019554; KEGG: sli:Slin_4088 polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein, BexD/CtrA/VexA family; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
 
 0.996
ADY52854.1
Polysaccharide export protein; InterPro IPR016160: IPR 003715; KEGG: phe:Phep_3890 polysaccharide export system outer membrane protein; PFAM: polysaccharide export protein; SPTR: Polysaccharide export system outer membrane protein; PFAM: Polysaccharide biosynthesis/export protein.
 
 
 0.984
ADY53763.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR 019554; KEGG: phe:Phep_3949 polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
 
 0.945
ADY51391.1
COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: pdi:BDI_1837 glycosyltransferase; PFAM: sugar transferase; SPTR: Glycosyltransferase; PFAM: Bacterial sugar transferase.
 
  
 0.932
ADY51641.1
Undecaprenyl-phosphate galactose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: phe:Phep_1953 sugar transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Putative glycosyltransferase; PFAM: Bacterial sugar transferase.
 
  
 0.908
ADY54377.1
PHP domain protein; COGs: COG4464 Capsular polysaccharide biosynthesis protein; InterPro IPR016667: IPR 004013; KEGG: chu:CHU_0001 capsular polysaccharide biosythesis protein; PFAM: PHP domain protein; SPTR: Capsular polysaccharide biosynthesis protein; PFAM: PHP domain.
  
 0.857
ADY51408.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: phe:Phep_3919 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Capsular polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.827
ADY53788.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: phe:Phep_3919 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Putative capsular polysaccharide biosynthesis protein; PFAM: CoA binding domain; Polysaccharide biosynthesis protein.
 
  
 0.804
ADY51386.1
Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: fba:FIC_00335 lipopolysaccharide biosynthesis protein WzxC; PFAM: polysaccharide biosynthesis protein; SPTR: Capsular polysaccharide repeat unit transporter; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.725
ADY53493.1
COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041: IPR 019574; KEGG: phe:Phep_4076 ferredoxin; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; SPTR: Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region.
    
 0.637
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.