STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51405.1KEGG: dps:DP0041 hypothetical protein; SPTR: Putative uncharacterized protein. (322 aa)    
Predicted Functional Partners:
ADY51406.1
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: btl:BALH_2628 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family protein; PFAM: Acetyltransferase (GNAT) family.
 
  
 0.845
ADY51408.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: phe:Phep_3919 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Capsular polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.742
ADY51404.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pca:Pcar_1522 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase; PFAM: Glycosyl transferases group 1.
  
  
 0.731
ADY51407.1
KEGG: rbi:RB2501_13334 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.662
ADY51403.1
Pectate lyase/Amb allergen; COGs: COG3866 Pectate lyase; InterPro IPR002022: IPR 006626; KEGG: nde:NIDE2720 hypothetical protein; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; Parallel beta-helix repeat; SPTR: Putative uncharacterized protein; PFAM: Pectate lyase.
       0.561
ADY54376.1
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888: IPR 001509; KEGG: phe:Phep_3611 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-D-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.514
ADY53788.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: phe:Phep_3919 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Putative capsular polysaccharide biosynthesis protein; PFAM: CoA binding domain; Polysaccharide biosynthesis protein.
  
  
 0.496
ADY52512.1
InterPro IPR000644; KEGG: phe:Phep_0982 CBS domain containing protein; PFAM: CBS domain containing protein; SPTR: CBS domain containing protein; PFAM: CBS domain.
  
  
 0.470
ADY51402.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR008089: IPR 001509; KEGG: cte:CT0230 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.468
ADY51394.1
Phytanoyl-CoA dioxygenase; COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: ppw:PputW619_3752 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase (PhyH).
       0.463
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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