STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51417.1Glycosyl hydrolase family 88; InterPro IPR010905; KEGG: phe:Phep_2694 glycosyl hydrolase family 88; PFAM: glycosyl hydrolase family 88; SPTR: Glycosyl hydrolase family 88; PFAM: Glycosyl Hydrolase Family 88. (401 aa)    
Predicted Functional Partners:
ADY51416.1
KEGG: phe:Phep_2696 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Alginate lyase.
     0.762
ADY51415.1
Glycoside hydrolase family 2 TIM barrel; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR 006104: IPR 006102: IPR 006103; KEGG: phe:Phep_2700 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; SPTR: Beta-galactosidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
       0.735
ADY51414.1
Integral membrane sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR 018060: IPR 005467: IPR 001789: IPR 018247: IPR 018062: IPR 003661: IPR 003594: IPR 011110: IPR 011123:I PR000005; KEGG: phe:Phep_2726 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; histidine kinase A domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator re [...]
     
 0.481
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.