STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51467.1KEGG: cim:CIMG_06919 hypothetical protein; SPTR: V-ATPase subunit C family protein. (67 aa)    
Predicted Functional Partners:
ADY51461.1
Hypothetical protein; KEGG: ooe:OEOE_1105 lysophospholipase L1 or related esterase; SPTR: Na(+)-translocating NADH-quinone reductase subunit C.
       0.773
ADY51462.1
KEGG: pdi:BDI_2140 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADY51463.1
KEGG: phe:Phep_0038 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
       0.773
ADY51464.1
Hypothetical protein; COGs: COG0358 DNA primase; InterPro IPR002694; KEGG: cph:Cpha266_2065 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CHC2 zinc finger.
       0.773
ADY51465.1
Hypothetical protein; InterPro IPR002296: IPR 002052; KEGG: cyc:PCC7424_0972 N-6 DNA methylase; SPTR: Type I restriction-modification system M subunit.
       0.773
ADY51466.1
KEGG: cpv:cgd1_3240 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADY51468.1
KEGG: nve:NEMVE_v1g212306 hypothetical protein; SPTR: Predicted protein.
       0.773
ADY51469.1
Hypothetical protein; KEGG: dsi:Dsim_GD23011 GD23011 gene product from transcript GD23011-RA; SPTR: GD23011.
       0.773
ADY51470.1
KEGG: phe:Phep_0039 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.701
ADY51471.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: pto:PTO0856 chromosome partition protein smc; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Predicted protein; PFAM: Helix-turn-helix.
       0.491
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.