STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51517.1InterPro IPR002502; KEGG: cpi:Cpin_0282 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: Possible N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase. (309 aa)    
Predicted Functional Partners:
ADY51520.1
Peptidase U35 phage prohead HK97; InterPro IPR006433; KEGG: bfs:BF2319 hypothetical protein; PFAM: peptidase U35 phage prohead HK97; SPTR: Putative caudovirus prohead protease; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.
 
     0.823
ADY51522.1
Phage uncharacterized protein; InterPro IPR006517; KEGG: gem:GM21_3672 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage uncharacterized protein; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain.
 
     0.802
ADY51516.1
Hypothetical protein; KEGG: dya:Dyak_GE10143 GE10143 gene product from transcript GE10143-RA; SPTR: GE10143.
       0.773
ADY51518.1
KEGG: ngr:NAEGRDRAFT_68785 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin.
       0.773
ADY51519.1
Hypothetical protein; KEGG: bcv:Bcav_0505 type I restriction-modification system, M subunit; SPTR: Putative uncharacterized protein.
       0.745
ADY51515.1
KEGG: pdi:BDI_0891 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.658
ADY51514.1
Hypothetical protein; KEGG: yen:YE1268 putative cytochrome c-type biogenesis protein; SPTR: Putative uncharacterized protein.
       0.652
ADY51525.1
Head morphogenesis protein SPP1 gp7; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279: IPR 006528; KEGG: nmn:NMCC_1029 hypothetical protein; PFAM: head morphogenesis protein SPP1 gp7; protein of unknown function DUF935; SPTR: Predicted protein; PFAM: Protein of unknown function (DUF935); Phage Mu protein F like protein.
 
     0.652
ADY51511.1
KEGG: gfo:GFO_2425 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.521
ADY51521.1
KEGG: dde:Dde_3371 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative ATPase subunit of terminase (gpP-like).
       0.441
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.