STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51541.1KEGG: aac:Aaci_0071 hypothetical protein; SPTR: Putative uncharacterized protein. (115 aa)    
Predicted Functional Partners:
ADY51540.1
SPTR: Surface protein Lk90-like protein.
       0.773
ADY51542.1
KEGG: aav:Aave_2914 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3164).
       0.588
ADY51543.1
KEGG: bfo:BRAFLDRAFT_124432 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.588
ADY51538.1
Protein of unknown function DUF437; InterPro IPR007374; KEGG: pru:PRU_0933 hypothetical protein; PFAM: protein of unknown function DUF437; SPTR: Putative uncharacterized protein; PFAM: ASCH domain.
     
 0.552
ADY51539.1
Hypothetical protein; KEGG: nvi:100123209 similar to GA18353-PA; SPTR: Putative uncharacterized protein.
       0.497
ADY51544.1
KEGG: tme:Tmel_0194 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.493
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.428
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
    0.427
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.